Index

A

add_prefix() (Converter method) add_prefix_synonym() (Converter method) add_record() (Converter method)

add_uri_prefix_synonym() (Converter method) as_str_triple() (Triple method) as_uri_triple() (Triple method)

B

bimap (Converter attribute)

bind_rdflib() (Converter method)

C

cache_ok (SAReferenceListTypeDecorator attribute) (SAReferenceTypeDecorator attribute) chain() (in module curies) compress() (Converter method) compress_or_standardize() (Converter method) compress_strict() (Converter method) Converter (class in curies) curie (Reference attribute) (ReferenceTuple attribute) CURIE_PATTERN (in module curies.w3c) CURIE_RE (in module curies.w3c) curies module curies.cli module

curies.database module curies.dataframe module curies.discovery module curies.mapping_service module curies.resolver_service module curies.triples module curies.w3c module

D

discover() (in module curies) discover_from_rdf() (in module curies)

DuplicatePrefixes DuplicateURIPrefixes DuplicateValueError

E

encode_curie_triple() (in module curies.triples) encode_uri_triple() (in module curies.triples) exclude_object_prefixes() (in module curies.triples) exclude_prefix_stratified_many_to_many() (in module curies.triples) exclude_prefixes_both() (in module curies.triples) exclude_references_both() (in module curies.triples) exclude_same_prefixes() (in module curies.triples) exclude_subject_prefixes() (in module curies.triples)

exclude_triples() (in module curies.triples) expand() (Converter method) expand_all() (Converter method) expand_or_standardize() (Converter method) expand_pair() (Converter method) expand_pair_all() (Converter method) expand_reference() (Converter method) expand_strict() (Converter method)

F

file_compress() (Converter method) file_expand() (Converter method) filter_df_by_curies() (in module curies) (in module curies.dataframe) filter_df_by_prefixes() (in module curies) (in module curies.dataframe) format_curie() (Converter method) from_converter() (PreprocessingConverter class method) from_curie() (NamableReference class method) (NamedReference class method) (Reference class method) (ReferenceTuple class method)

from_curies() (Triple class method) from_extended_prefix_map() (Converter class method) from_jsonld() (Converter class method) from_jsonld_github() (Converter class method) from_prefix_map() (Converter class method) from_priority_prefix_map() (Converter class method) from_rdflib() (Converter class method) from_reference() (NamableReference class method) (NamedReference class method) (Reference class method) from_reverse_prefix_map() (Converter class method) from_shacl() (Converter class method) from_uris() (Triple class method)

G

get_bioregistry_converter() (in module curies) get_df_curies_index() (in module curies.dataframe) get_df_prefixes_index() (in module curies.dataframe) get_df_unique_prefixes() (in module curies.dataframe) get_fastapi_app() (in module curies.resolver_service) get_fastapi_mapping_app() (in module curies.mapping_service) get_fastapi_router() (in module curies.mapping_service) (in module curies.resolver_service) get_filter_df_by_curies_index() (in module curies.dataframe) get_filter_df_by_prefixes_index() (in module curies.dataframe) get_flask_app() (in module curies.resolver_service) get_flask_blueprint() (in module curies.resolver_service) get_flask_mapping_app() (in module curies.mapping_service)

get_flask_mapping_blueprint() (in module curies.mapping_service) get_go_converter() (in module curies) get_monarch_converter() (in module curies) get_obo_converter() (in module curies) get_prefixcommons_converter() (in module curies) get_prefixes() (Converter method) get_record() (Converter method) get_reference_list_sa_column() (in module curies.database) get_reference_sa_column() (in module curies.database) get_reference_sa_composite() (in module curies.database) get_subconverter() (Converter method) get_uri_prefixes() (Converter method) get_version() (in module curies)

H

has_prefix() (Converter method)

hash_triple() (Converter method) (in module curies.triples)

I

identifier (ReferenceTuple attribute) is_curie() (Converter method)

is_uri() (Converter method) is_w3c_curie() (in module curies.w3c) is_w3c_prefix() (in module curies.w3c)

K

keep_object_prefixes() (in module curies.triples) keep_predicates() (in module curies.triples) keep_prefixes_both() (in module curies.triples) keep_prefixes_either() (in module curies.triples)

keep_references_both() (in module curies.triples) keep_references_either() (in module curies.triples) keep_subject_prefixes() (in module curies.triples) keep_triples_by_hash() (in module curies.triples)

L

lint_file() (PreprocessingRules class method) load_extended_prefix_map() (in module curies) load_jsonld_context() (in module curies)

load_prefix_map() (in module curies) load_shacl() (in module curies) LOCAL_UNIQUE_IDENTIFIER_PATTERN (in module curies.w3c) LOCAL_UNIQUE_IDENTIFIER_RE (in module curies.w3c)

M

MappingServiceGraph (class in curies.mapping_service) MappingServiceSPARQLProcessor (class in curies.mapping_service) model_config (NamableReference attribute) (NamedReference attribute) (PostprocessingRewrites attribute) (PrefixMap attribute) (PreprocessingBlocklists attribute) (PreprocessingRewrites attribute) (PreprocessingRules attribute) (Record attribute) (Records attribute) (Reference attribute) (Triple attribute)

module curies curies.cli curies.database curies.dataframe curies.discovery curies.mapping_service curies.resolver_service curies.triples curies.w3c

N

NamableReference (class in curies) NamedReference (class in curies)

NCNAME_PATTERN (in module curies.w3c) NCNAME_RE (in module curies.w3c)

O

object (StrTriple attribute)

P

pair (Reference attribute) parse() (Converter method) (PreprocessingConverter method) parse_curie() (Converter method) (PreprocessingConverter method) parse_uri() (Converter method) (PreprocessingConverter method) pd_compress() (Converter method) pd_expand() (Converter method) pd_standardize_curie() (Converter method) pd_standardize_prefix() (Converter method) pd_standardize_uri() (Converter method) PostprocessingRewrites (class in curies) predicate (StrTriple attribute)

Prefix (class in curies) prefix (ReferenceTuple attribute) prefix_map (Converter attribute) prefix_not_in_synonyms() (Record class method) PrefixMap (class in curies) PreprocessingBlocklists (class in curies) PreprocessingConverter (class in curies) PreprocessingRewrites (class in curies) PreprocessingRules (class in curies) process() (in module curies) (SemanticallyProcessable method) process_bind_param() (SAReferenceListTypeDecorator method) (SAReferenceTypeDecorator method) process_result_value() (SAReferenceListTypeDecorator method) (SAReferenceTypeDecorator method)

Q

query() (MappingServiceSPARQLProcessor method)

R

read_triples() (in module curies.triples) Record (class in curies) Records (class in curies) Reference (class in curies) ReferenceTuple (class in curies) remap_curie_prefixes() (in module curies) remap_full() (PreprocessingRewrites method) (PreprocessingRules method)

remap_prefix() (PreprocessingRewrites method) (PreprocessingRules method) remap_uri_prefixes() (in module curies) reverse_bimap (Converter attribute) reverse_prefix_map (Converter attribute) rewire() (in module curies)

S

SAReferenceListTypeDecorator (class in curies.database) SAReferenceTypeDecorator (class in curies.database) SemanticallyProcessable (class in curies) SemanticallyStandardizable (class in curies) standardize() (in module curies) (SemanticallyStandardizable method) standardize_curie() (Converter method) standardize_identifier() (Converter method) standardize_prefix() (Converter method)

standardize_reference() (Converter method) standardize_uri() (Converter method) str_has_blocked_prefix() (PreprocessingBlocklists method) str_has_blocked_suffix() (PreprocessingBlocklists method) str_is_blocked() (PreprocessingBlocklists method) (PreprocessingRules method) str_is_blocked_full() (PreprocessingBlocklists method) StrTriple (class in curies.triples) subject (StrTriple attribute)

T

to_pydantic() (ReferenceTuple method) Triple (class in curies)

TriplePredicate (in module curies.triples) triples() (MappingServiceGraph method) TripleType (in module curies.triples)

U

upgrade_prefix_map() (in module curies)

uri_prefix_not_in_synonyms() (Record class method)

W

with_name() (NamableReference method) (NamedReference method) (Reference method) without_name() (NamableReference method) (Reference method)

write_extended_prefix_map() (in module curies) write_jsonld_context() (in module curies) write_shacl() (in module curies) write_triples() (in module curies.triples) write_tsv() (in module curies)